| Supplemental Table S8. List of accessions for each G. hirsutum core set identified by maximizing allelic richness using a simulated annealing algorithm in Powermarker. | ||||||||
| Core set size | Number of alleles | % of alleles in G. hirsutum panel | Accessions selected for each core set | |||||
| 10 | 436 | 66 | PD 785, TX-0002, TX-1166, TX-1324, TX-0081, TX-0329, TX-0119, TX-0168, TX-0209, TX-0026 | |||||
| 15 | 480 | 73 | TX-0002, TX-1148, TX-1324, TX-0007, TX-0081, TX-0329, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0570, TX-0636, TX-0725, TX-0026 | |||||
| 20 | 515 | 78 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, TX-0002, TX-0048, TX-0057, TX-0060, TX-0469, TX-1324, TX-2106, TX-0081, TX-0329, TX-0119, TX-0140, TX-0168, TX-0209, TX-0570, TX-0636, TX-0026, TX-0046 | |||||
| 25 | 537 | 81 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, TX-0002, TX-0048, TX-0050, TX-0060, TX-1131, TX-1148, TX-1324, TX-1325, TX-0007, TX-0030, TX-0081, TX-0329, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0570, TX-0636, TX-0016, TX-0026, TX-0046 | |||||
| 30 | 552 | 83 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, Auburn 634RNR, TX-0002, TX-0048, TX-0060, TX-1148, TX-1168, TX-1324, TX-1325, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0329, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0570, TX-0636, TX-0016, TX-0026, TX-0046 | |||||
| 35 | 566 | 85 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, PD 4461Q, TX-0002, TX-0048, TX-0060, TX-0062, TX-0066, TX-0236, TX-0320, TX-1005, TX-1053, TX-1148, TX-1168, TX-1324, TX-2106, TX-2387, TX-2410, TX-0007, TX-0081, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0228, TX-0570, TX-0620, TX-0636, TX-0763, TX-0016, TX-0019, TX-0026, TX-0046 | |||||
| 40 | 578 | 87 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, PD 2164, PD 4461Q, Auburn 634RNR, SOUTHLAND M1, TX-0002, TX-0048, TX-0060, TX-0062, TX-0065, TX-0320, TX-0931, TX-1005, TX-1053, TX-1148, TX-1168, TX-1324, TX-1464, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0570, TX-0620, TX-0636, TX-0725, TX-0763, TX-0016, TX-0026, TX-0039, TX-0046 | |||||
| 45 | 589 | 89 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, M4, NC 88-95, PD 4461Q, Auburn 634RNR, SOUTHLAND M1, TX-0002, TX-0048, TX-0060, TX-0062, TX-0065, TX-0066, TX-0320, TX-0738, TX-0931, TX-1053, TX-1131, TX-1148, TX-1168, TX-1324, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0329, TX-0119, TX-0121, TX-0140, TX-0158, TX-0168, TX-0209, TX-0338, TX-0570, TX-0620, TX-0636, TX-0763, TX-0016, TX-0019, TX-0026, TX-0039, TX-0046 | |||||
| 50 | 599 | 90 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, M4, PD 4461Q, PSC 355, Auburn 634RNR, SOUTHLAND M1, TX-0002, TX-0048, TX-0061, TX-0065, TX-0066, TX-0106, TX-0236, TX-0267, TX-0320, TX-0401,TX-0469, TX-0931, TX-1005, TX-1053, TX-1119, TX-1148, TX-1168, TX-1324, TX-1556, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-00722, TX-0119, TX-0140, TX-0158, TX-0168, TX-0197, TX-0209, TX-0338, TX-0570, TX-0620, TX-0636, TX-0763, TX-0016, TX-0019, TX-0026, TX-0039, TX-0046 | |||||
| 55 | 608 | 92 | AK-DJURA GREEN LINT, BULGARIA 432, LANKART 311, M4, MD51NE, MULTIPLE MARKER, PD 2164, PD 4461Q, Auburn 634RNR, SOUTHLAND M1, TX-0002, TX-0048, TX-0053, TX-0060, TX-0061, TX-0067, TX-0065, TX-0066, TX-0106, TX-0236, TX-0267, TX-0320, TX-0401, TX-0469, TX-0931, TX-1053, TX-1121, TX-1131, TX-1166, TX-1168, TX-1324, TX-1464, TX-1556, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0329, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0338, TX-0570, TX-0620, TX-0636, TX-0763, TX-0016, TX-0019, TX-0026, TX-0039, TX-0046 | |||||
| 60 | 616 | 93 | AK-DJURA GREEN LINT, BJAGL NECT, BULGARIA 432, LANKART 311, M4, MULTIPLE MARKER, NC 88-95, PD 2164, PD 4461Q, Auburn 634RNR, SEALAND #7 YELLOW FLOWER, SOUTHLAND M1, TX-0002, TX-0048, TX-0053, TX-0060, TX-0061, TX-0062, TX-0067, TX-0065, TX-0066, TX-0106, TX-0152, TX-0214, TX-0236, TX-0320, TX-0469, TX-0775, TX-0931, TX-1005, TX-1053, TX-1119, TX-1148, TX-1168, TX-1324, TX-1464, TX-2106, TX-2387, TX-2408, TX-2410, TX-0007, TX-0030, TX-0081, TX-0072, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0237, TX-0338, TX-0570, TX-0620, TX-0636, TX-0725, TX-0763, TX-0016, TX-0019, TX-0026, TX-0039, TX-0046 | |||||
| 65 | 621 | 94 | ACALA SJ-4, AK-DJURA GREEN LINT, ARKANSAS 10, BULGARIA 432, LANKART 311, M4, MD51NE, MULTIPLE MARKER, NC 88-95, PD 2164, PD 4461Q, PD 781, Auburn 634RNR, SEALAND #7 WHITE FLOWER, SOUTHLAND M1, TX-0002, TX-0048, TX-0053, TX-0060, TX-0061, TX-0062, TX-0065, TX-0066, TX-0106, TX-0236, TX-0267, TX-0320, TX-0404, TX-0466, TX-0469, TX-0931, TX-1005, TX-1053, TX-1119, TX-1166, TX-1168, TX-1324, TX-1801, TX-2106, TX-2289, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0104, TX-0119, TX-0121, TX-0140, TX-0158, TX-0168, TX-0171, TX-0209, TX-0228, TX-0338, TX-0570, TX-0620, TX-0636, TX-0763, TX-0016, TX-0019, TX-0026, TX-0037, TX-0039, TX-0046 | |||||
| 70 | 626 | 95 | AK-DJURA GREEN LINT, ALLEN 33, BJAGL NECT, BULGARIA 432, MACHA WR 2 (J. GANNAWAY), HOPI MOENCOPI, LANKART 311, M4, MULTIPLE MARKER, NC 88-95, PAYMASTER HS26, PD 2164, PD 2165, PD 4461Q, Auburn 634RNR, SEALAND #7 YELLOW FLOWER, SOUTHLAND M1, TX-0002, TX-0048, TX-0053, TX-0067, TX-0061, TX-0062, TX-0065, TX-0066, TX-0105, TX-0106, TX-0152, TX-0214, TX-0227, TX-0236, TX-0320, TX-0401, TX-0469, TX-0773, TX-0931, TX-1005, TX-1053, TX-1119, TX-1121, TX-1131, TX-1148, TX-1168, TX-1324, TX-1464, TX-1556, TX-1801, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0068, TX-0072, TX-0119, TX-0140, TX-0158, TX-0168, TX-0209, TX-0338, TX-0570, TX-0620, TX-0636, TX-0763, TX-0016, TX-0019, TX-0022, TX-0026, TX-0046 | |||||
| 75 | 631 | 95 | ALLEN 33, BULGARIA 432, CA23, F-2-C-10, GREEN, LANKART 311, M4, MULTIPLE MARKER, PD 0113, PD 2164, PD 4461Q, Auburn 634RNR, SC-1, SOUTHLAND M1, STATION MILLER, WILDS, WILD'S 18, TX-0002, TX-0048, TX-0053, TX-0060, TX-0061, TX-0062, TX-0067, TX-0058, TX-0065, TX-0066, TX-0106, TX-0112, TX-0152, TX-0199, TX-0236, TX-0320, TX-0404, TX-0469, TX-0738, TX-0931, TX-1005, TX-1053, TX-1121, TX-1166, TX-1168, TX-1324, TX-1556, TX-2106, TX-2387, TX-2408, TX-2410, TX-0007, TX-0030, TX-0081, TX-0174, TX-0329, TX-0119, TX-0121, TX-0140, TX-0156, TX-0158, TX-0168, TX-0197, TX-0209, TX-0338, TX-0570, TX-0620, TX-0636, TX-0763, TX-0790, TX-0016, TX-0019, TX-0026, TX-0034, TX-0037, TX-0046 | |||||
| 80 | 636 | 96 | ACALA ROYALE, AK-DJURA GREEN LINT, AK-DJURA VIRESCENT, ALLEN 33, BULGARIA 432, EMPIRE WR, FJA, GLANDLESS NC-1, HOPI MOENCOPI, LANKART 311, M4, MULTIPLE MARKER, NC 88-95, PAYMASTER HS26, PD 2164, PD 4461Q, ROGERS LG-10, Auburn 634RNR, SC-1, SOUTHLAND M1, WILDS, WILDS 34-4(411) T85-2, TX-0002, TX-0040, TX-0043, TX-0048, TX-0053, TX-0060, TX-0061, TX-0062, TX-0065, TX-0066, TX-0106, TX-0112, TX-0236, TX-0267, TX-0320, TX-0401, TX-0464, TX-0466, TX-0469, TX-0773, TX-0931, TX-1003, TX-1005, TX-1053, TX-1121, TX-1148, TX-1168, TX-1324, TX-1801, TX-2106, TX-2387, TX-2410, TX-0007, TX-0030, TX-0081, TX-0329, TX-0068, TX-0119, TX-0121, TX-0140, TX-0158, TX-0168, TX-0171, TX-0209, TX-0338, TX-0570, TX-0620, TX-0636, TX-0725, TX-0763, TX-0790, TX-0016, TX-0019, TX-0022, TX-0026, TX-0034, TX-0037, TX-0039, TX-0046 | |||||